Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 n-R5s1-201ENSMUST00000101925 119 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm28580-201ENSMUST00000186767 88 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm5050-201ENSMUST00000197164 775 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC12.11□□□□□ -0.47
Cux1P53564 Gm42760-201ENSMUST00000199814 311 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC12.11□□□□□ -0.47
Cux1P53564 AC163296.1-202ENSMUST00000218395 661 ntBASIC12.11□□□□□ -0.47
Cux1P53564 AC163296.1-201ENSMUST00000220004 1266 ntBASIC12.11□□□□□ -0.47
Cux1P53564 AC135292.2-201ENSMUST00000227559 367 ntBASIC12.11□□□□□ -0.47
Cux1P53564 AC157212.1-201ENSMUST00000228398 1075 ntBASIC12.11□□□□□ -0.47
Cux1P53564 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cux1P53564 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cux1P53564 Gm37960-201ENSMUST00000192402 1897 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC12.1□□□□□ -0.47
Cux1P53564 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Gm42444-201ENSMUST00000199366 4558 ntBASIC12.1□□□□□ -0.47
Cux1P53564 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cux1P53564 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Gm42572-201ENSMUST00000202292 3378 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Synpo2-201ENSMUST00000051443 3719 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cux1P53564 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cux1P53564 Gm7746-201ENSMUST00000120966 503 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Gm7599-201ENSMUST00000121453 796 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC12.1□□□□□ -0.47
Cux1P53564 Gm6264-201ENSMUST00000160802 624 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Mir6987-201ENSMUST00000184789 73 ntBASIC12.1□□□□□ -0.47
Cux1P53564 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Gm42804-201ENSMUST00000199701 178 ntBASIC12.1□□□□□ -0.47
Cux1P53564 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cux1P53564 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cux1P53564 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cux1P53564 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC12.1□□□□□ -0.47
Cux1P53564 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm43589-201ENSMUST00000199400 1523 ntBASIC12.09□□□□□ -0.47
Cux1P53564 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm8995-202ENSMUST00000208417 3490 ntBASIC12.09□□□□□ -0.47
Cux1P53564 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC12.09□□□□□ -0.47
Cux1P53564 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Gm42656-201ENSMUST00000201506 2305 ntBASIC12.09□□□□□ -0.47
Cux1P53564 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm6434-201ENSMUST00000163316 372 ntBASIC12.09□□□□□ -0.47
Cux1P53564 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm34144-201ENSMUST00000197039 259 ntBASIC12.09□□□□□ -0.47
Cux1P53564 Gm10043-201ENSMUST00000210691 235 ntBASIC12.09□□□□□ -0.47
Cux1P53564 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 Gm37829-201ENSMUST00000193864 2213 ntBASIC12.09□□□□□ -0.47
Cux1P53564 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cux1P53564 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC12.09□□□□□ -0.47
Cux1P53564 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cux1P53564 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cux1P53564 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cux1P53564 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cux1P53564 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cux1P53564 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cux1P53564 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cux1P53564 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC12.08□□□□□ -0.48
Cux1P53564 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC12.08□□□□□ -0.48
Cux1P53564 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC12.08□□□□□ -0.48
Cux1P53564 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms