Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cntn3Q07409 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cntn3Q07409 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
Cntn3Q07409 Gm11868-201ENSMUST00000121594 1478 ntBASIC8.77□□□□□ -1
Cntn3Q07409 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC8.77□□□□□ -1
Cntn3Q07409 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cntn3Q07409 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Cntn3Q07409 Rps6ka1-206ENSMUST00000168974 2982 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm5442-201ENSMUST00000202121 2034 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm37978-201ENSMUST00000194736 2915 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm13682-201ENSMUST00000117524 702 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm24307-201ENSMUST00000178512 101 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm7631-201ENSMUST00000196935 1100 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm42581-201ENSMUST00000201774 966 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 AC140368.1-202ENSMUST00000226131 658 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Oard1-201ENSMUST00000046651 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm16026-201ENSMUST00000094774 580 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm28451-201ENSMUST00000189311 2560 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 H2-M10.6-201ENSMUST00000041398 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm37060-201ENSMUST00000194997 2397 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm12430-201ENSMUST00000121539 1322 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.77□□□□□ -1.01
Cntn3Q07409 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cntn3Q07409 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
Cntn3Q07409 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Nfam1-201ENSMUST00000023076 2811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm44883-201ENSMUST00000206063 3258 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm11875-201ENSMUST00000118187 799 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Psph-202ENSMUST00000118268 785 ntTSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm23884-201ENSMUST00000122687 294 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm22923-201ENSMUST00000174952 110 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm4891-201ENSMUST00000182279 912 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm3142-201ENSMUST00000190107 414 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm28341-201ENSMUST00000190883 472 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm18529-201ENSMUST00000193025 1257 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm4410-201ENSMUST00000199349 686 ntBASIC8.76□□□□□ -1.01
Cntn3Q07409 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cntn3Q07409 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.76□□□□□ -1.01
Cntn3Q07409 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms