Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mak-205ENSMUST00000224740 2354 ntAPPRIS ALT2 BASIC8.63□□□□□ -1.03
Sox1P53783 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Gm17743-201ENSMUST00000198545 1675 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Gm42575-201ENSMUST00000202942 1674 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Gm42460-201ENSMUST00000198863 2567 ntBASIC8.63□□□□□ -1.03
Sox1P53783 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Cks1b-202ENSMUST00000107422 766 ntTSL 2 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm7599-201ENSMUST00000121453 796 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Gm11349-201ENSMUST00000122209 1116 ntBASIC8.63□□□□□ -1.03
Sox1P53783 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Mir7082-201ENSMUST00000183526 92 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.63□□□□□ -1.03
Sox1P53783 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC8.63□□□□□ -1.03
Sox1P53783 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Ighv6-2-201ENSMUST00000192430 295 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Gm37809-201ENSMUST00000195050 931 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm44694-201ENSMUST00000205317 1298 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Gm31711-201ENSMUST00000220687 196 ntBASIC8.63□□□□□ -1.03
Sox1P53783 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.63□□□□□ -1.03
Sox1P53783 AC154461.5-201ENSMUST00000225429 774 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Mir7b-201ENSMUST00000083557 111 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Gm37443-201ENSMUST00000193458 2827 ntBASIC8.63□□□□□ -1.03
Sox1P53783 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Cd4-201ENSMUST00000024044 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Sox1P53783 Arhgap28-203ENSMUST00000164647 2754 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm28095-201ENSMUST00000186343 1515 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Lilr4b-201ENSMUST00000102894 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Phka2-201ENSMUST00000033652 4133 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Sox1P53783 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC8.62□□□□□ -1.03
Sox1P53783 Pilrb1-206ENSMUST00000199387 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Gm4349-201ENSMUST00000181809 2559 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Sox1P53783 Gm9266-201ENSMUST00000117401 484 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm13735-201ENSMUST00000120217 670 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm14141-201ENSMUST00000120236 783 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm8051-201ENSMUST00000120464 466 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Sox1P53783 Gm12642-201ENSMUST00000121098 876 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.62□□□□□ -1.03
Sox1P53783 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Sox1P53783 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC8.62□□□□□ -1.03
Sox1P53783 Gm24057-201ENSMUST00000158616 302 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm8398-201ENSMUST00000172081 364 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Sox1P53783 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm20689-201ENSMUST00000176033 279 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Sox1P53783 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm24362-201ENSMUST00000183220 416 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm27435-201ENSMUST00000183588 88 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm27845-201ENSMUST00000184479 114 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm18984-201ENSMUST00000193998 1124 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm18382-201ENSMUST00000194394 582 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm37901-201ENSMUST00000195107 514 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm43590-201ENSMUST00000195987 387 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Gm7542-201ENSMUST00000201140 777 ntBASIC8.62□□□□□ -1.03
Sox1P53783 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms