Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 AC160118.1-201ENSMUST00000214497 2457 ntBASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 AC099612.1-201ENSMUST00000226318 1636 ntBASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Vps53Q8CCB4 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm23529-201ENSMUST00000104562 132 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm11259-201ENSMUST00000120554 715 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm24004-201ENSMUST00000158460 178 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm9399-201ENSMUST00000175771 639 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm42489-201ENSMUST00000198964 669 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm44018-201ENSMUST00000204471 407 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm8838-201ENSMUST00000212978 541 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 AC154843.1-201ENSMUST00000226897 1138 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 CT009515.1-201ENSMUST00000228127 586 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 AC131586.4-201ENSMUST00000228424 668 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm11870-201ENSMUST00000119255 1322 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Gm8204-201ENSMUST00000185696 2144 ntBASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Vps53Q8CCB4 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm14561-201ENSMUST00000117376 798 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm11933-201ENSMUST00000121550 375 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Scgb2b30-201ENSMUST00000187013 336 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Scgb2b10-201ENSMUST00000191403 318 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm38063-201ENSMUST00000193990 342 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 AC147044.1-201ENSMUST00000223850 552 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 AC122346.1-202ENSMUST00000225586 2116 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 AC107711.5-201ENSMUST00000228149 594 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm6054-201ENSMUST00000078052 378 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm26003-201ENSMUST00000083061 113 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 AC121942.3-201ENSMUST00000225768 1436 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Vps53Q8CCB4 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 AC124572.1-201ENSMUST00000218155 2406 ntBASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Vps53Q8CCB4 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms