Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC125464.1-201ENSMUST00000228013 512 ntBASIC8.65□□□□□ -1.02
Sox1P53783 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sox1P53783 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sox1P53783 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Sox1P53783 Gm43764-201ENSMUST00000202553 3172 ntBASIC8.65□□□□□ -1.02
Sox1P53783 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sox1P53783 AC154352.1-201ENSMUST00000221477 2365 ntBASIC8.65□□□□□ -1.02
Sox1P53783 AC134869.1-201ENSMUST00000225230 2354 ntBASIC8.65□□□□□ -1.02
Sox1P53783 Rcbtb2-209ENSMUST00000164822 3531 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sox1P53783 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Sox1P53783 Wdr61-202ENSMUST00000118771 3372 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Sox1P53783 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Sox1P53783 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sox1P53783 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Sox1P53783 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sox1P53783 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
Sox1P53783 Ezh2-202ENSMUST00000092648 2115 ntTSL 5 BASIC8.65□□□□□ -1.03
Sox1P53783 Gm43413-201ENSMUST00000200411 1566 ntBASIC8.65□□□□□ -1.03
Sox1P53783 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sox1P53783 Rnf122-201ENSMUST00000046941 3582 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Sox1P53783 Hrh4-201ENSMUST00000041676 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 AC079245.1-201ENSMUST00000215680 1454 ntBASIC8.64□□□□□ -1.03
Sox1P53783 C330018D20Rik-201ENSMUST00000025488 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Olfr297-202ENSMUST00000172965 1928 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm4640-201ENSMUST00000203927 2352 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.64□□□□□ -1.03
Sox1P53783 CT010486.2-201ENSMUST00000224003 2714 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Scnn1a-203ENSMUST00000176110 3494 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Ola1-202ENSMUST00000100015 905 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Sox1P53783 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC8.64□□□□□ -1.03
Sox1P53783 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Gm9311-201ENSMUST00000118042 1269 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm8688-201ENSMUST00000118240 969 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm12713-201ENSMUST00000118404 764 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Rpl36-ps1-201ENSMUST00000119508 303 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm9378-201ENSMUST00000120315 471 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm12383-201ENSMUST00000120628 760 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm5931-201ENSMUST00000121308 477 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm26254-201ENSMUST00000122491 118 ntBASIC8.64□□□□□ -1.03
Sox1P53783 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.64□□□□□ -1.03
Sox1P53783 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Gm6536-201ENSMUST00000171180 615 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm18821-201ENSMUST00000184135 709 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Mir8095-201ENSMUST00000185103 129 ntBASIC8.64□□□□□ -1.03
Sox1P53783 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm20776-201ENSMUST00000189940 700 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm44247-201ENSMUST00000203875 277 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm9249-201ENSMUST00000221420 578 ntBASIC8.64□□□□□ -1.03
Sox1P53783 AC154603.2-201ENSMUST00000223896 577 ntBASIC8.64□□□□□ -1.03
Sox1P53783 AC158983.1-201ENSMUST00000225691 221 ntBASIC8.64□□□□□ -1.03
Sox1P53783 AC147096.1-201ENSMUST00000227648 352 ntBASIC8.64□□□□□ -1.03
Sox1P53783 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.64□□□□□ -1.03
Sox1P53783 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Foxp3-201ENSMUST00000045566 3572 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Arnt-202ENSMUST00000090804 4325 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Sox1P53783 Gpr1-201ENSMUST00000050536 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Tbx19-201ENSMUST00000027859 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Sox1P53783 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Sox1P53783 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC8.63□□□□□ -1.03
Sox1P53783 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.63□□□□□ -1.03
Sox1P53783 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Sox1P53783 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms