Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Gm42908-201ENSMUST00000197508 870 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Gm18118-201ENSMUST00000201064 645 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Gm18058-201ENSMUST00000207385 492 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Gm44714-201ENSMUST00000208665 657 ntTSL 3 BASIC6.95□□□□□ -1.3
Cd28P31041 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC6.95□□□□□ -1.3
Cd28P31041 AC167019.4-201ENSMUST00000226494 1070 ntBASIC6.95□□□□□ -1.3
Cd28P31041 AC139758.2-201ENSMUST00000228380 529 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cd28P31041 Snora61-201ENSMUST00000083015 130 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Mir341-201ENSMUST00000093593 96 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cd28P31041 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cd28P31041 AC107453.1-201ENSMUST00000227490 3268 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Cd28P31041 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cd28P31041 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
Cd28P31041 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
Cd28P31041 AC132384.4-201ENSMUST00000220343 1397 ntBASIC6.95□□□□□ -1.3
Cd28P31041 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cd28P31041 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.94□□□□□ -1.3
Cd28P31041 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.94□□□□□ -1.3
Cd28P31041 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cd28P31041 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cd28P31041 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm15464-201ENSMUST00000118718 431 ntBASIC6.94□□□□□ -1.3
Cd28P31041 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC6.94□□□□□ -1.3
Cd28P31041 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.94□□□□□ -1.3
Cd28P31041 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Cd28P31041 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC6.94□□□□□ -1.3
Cd28P31041 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm7456-201ENSMUST00000182862 1011 ntBASIC6.94□□□□□ -1.3
Cd28P31041 Gm37787-201ENSMUST00000192524 585 ntTSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm36996-201ENSMUST00000194466 250 ntBASIC6.94□□□□□ -1.3
Cd28P31041 Gm43560-201ENSMUST00000198100 773 ntBASIC6.94□□□□□ -1.3
Cd28P31041 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm6129-201ENSMUST00000220725 801 ntBASIC6.94□□□□□ -1.3
Cd28P31041 AC159293.1-201ENSMUST00000222662 545 ntTSL 3 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm4257-201ENSMUST00000222877 513 ntBASIC6.94□□□□□ -1.3
Cd28P31041 AC101831.1-201ENSMUST00000228245 691 ntBASIC6.94□□□□□ -1.3
Cd28P31041 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Cd28P31041 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC6.94□□□□□ -1.3
Cd28P31041 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Cd28P31041 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Cd28P31041 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC6.94□□□□□ -1.3
Cd28P31041 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Cd28P31041 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Cd28P31041 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms