Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vstm4T1NXB5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vstm4T1NXB5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vstm4T1NXB5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.3■□□□□ 0.84
Vstm4T1NXB5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vstm4T1NXB5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
Vstm4T1NXB5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vstm4T1NXB5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vstm4T1NXB5 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.29■□□□□ 0.84
Vstm4T1NXB5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Vstm4T1NXB5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.29■□□□□ 0.84
Vstm4T1NXB5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.29■□□□□ 0.84
Vstm4T1NXB5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vstm4T1NXB5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.27■□□□□ 0.84
Vstm4T1NXB5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vstm4T1NXB5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vstm4T1NXB5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Vstm4T1NXB5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vstm4T1NXB5 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.26■□□□□ 0.83
Vstm4T1NXB5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vstm4T1NXB5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vstm4T1NXB5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vstm4T1NXB5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vstm4T1NXB5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vstm4T1NXB5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Gm7860-201ENSMUST00000121190 879 ntBASIC20.24■□□□□ 0.83
Vstm4T1NXB5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.24■□□□□ 0.83
Vstm4T1NXB5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Gm12251-201ENSMUST00000117893 792 ntBASIC20.23■□□□□ 0.83
Vstm4T1NXB5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vstm4T1NXB5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vstm4T1NXB5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vstm4T1NXB5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms