Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldn6Q9Z262 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.58■□□□□ 0.4
Cldn6Q9Z262 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cldn6Q9Z262 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.58■□□□□ 0.4
Cldn6Q9Z262 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn6Q9Z262 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn6Q9Z262 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn6Q9Z262 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn6Q9Z262 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn6Q9Z262 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Gm13146-201ENSMUST00000118508 780 ntBASIC17.52■□□□□ 0.4
Cldn6Q9Z262 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cldn6Q9Z262 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn6Q9Z262 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn6Q9Z262 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn6Q9Z262 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn6Q9Z262 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms