Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn9Q9Z0S7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn9Q9Z0S7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.04■□□□□ 0.48
Cldn9Q9Z0S7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn9Q9Z0S7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn9Q9Z0S7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn9Q9Z0S7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn9Q9Z0S7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn9Q9Z0S7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn9Q9Z0S7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Cldn9Q9Z0S7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn9Q9Z0S7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cldn9Q9Z0S7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn9Q9Z0S7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.98■□□□□ 0.47
Cldn9Q9Z0S7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms