Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cr1Q9Z0D9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cx3cr1Q9Z0D9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cx3cr1Q9Z0D9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.86■□□□□ 0.13
Cx3cr1Q9Z0D9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cx3cr1Q9Z0D9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cr1Q9Z0D9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cx3cr1Q9Z0D9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Gm22238-201ENSMUST00000175222 88 ntBASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cr1Q9Z0D9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms