Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf4Q9QZS2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.92■□□□□ 0.62
Rnf4Q9QZS2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf4Q9QZS2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rnf4Q9QZS2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.92■□□□□ 0.62
Rnf4Q9QZS2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rnf4Q9QZS2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf4Q9QZS2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf4Q9QZS2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Rnf4Q9QZS2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Rnf4Q9QZS2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rnf4Q9QZS2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf4Q9QZS2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rnf4Q9QZS2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Gm40881-201ENSMUST00000223397 166 ntBASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rnf4Q9QZS2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rnf4Q9QZS2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Gm43566-201ENSMUST00000196851 808 ntBASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Gm10232-201ENSMUST00000089221 720 ntBASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.85■□□□□ 0.61
Rnf4Q9QZS2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms