Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr4Q9QUK6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr4Q9QUK6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr4Q9QUK6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Tlr4Q9QUK6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr4Q9QUK6 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr4Q9QUK6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Gm5408-201ENSMUST00000197998 747 ntBASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tlr4Q9QUK6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.34■□□□□ 0.53
Tlr4Q9QUK6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr4Q9QUK6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr4Q9QUK6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr4Q9QUK6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.31■□□□□ 0.52
Tlr4Q9QUK6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms