Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdc42ep4Q9JM96 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdc42ep4Q9JM96 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Gm10812-201ENSMUST00000099864 546 ntBASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdc42ep4Q9JM96 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Gm6420-201ENSMUST00000193885 723 ntBASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc42ep4Q9JM96 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Gm37856-201ENSMUST00000191634 999 ntBASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdc42ep4Q9JM96 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Gm38205-201ENSMUST00000192243 258 ntBASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc42ep4Q9JM96 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdc42ep4Q9JM96 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdc42ep4Q9JM96 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Gm6211-202ENSMUST00000167849 925 ntBASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdc42ep4Q9JM96 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdc42ep4Q9JM96 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdc42ep4Q9JM96 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms