Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a2Q9JLR1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a2Q9JLR1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Gm27801-201ENSMUST00000184174 223 ntBASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a2Q9JLR1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a2Q9JLR1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Gm18284-201ENSMUST00000172604 624 ntBASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a2Q9JLR1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a2Q9JLR1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a2Q9JLR1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms