Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rfx5Q9JL61 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.88■□□□□ 0.77
Rfx5Q9JL61 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Gm13148-201ENSMUST00000118892 745 ntBASIC19.87■□□□□ 0.77
Rfx5Q9JL61 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx5Q9JL61 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx5Q9JL61 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Gm12933-201ENSMUST00000120203 872 ntBASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx5Q9JL61 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx5Q9JL61 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.83■□□□□ 0.77
Rfx5Q9JL61 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx5Q9JL61 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx5Q9JL61 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx5Q9JL61 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx5Q9JL61 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Gm7290-201ENSMUST00000104990 617 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Gm12918-201ENSMUST00000120234 636 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Gm15710-201ENSMUST00000121821 636 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Gm5075-201ENSMUST00000196916 622 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx5Q9JL61 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx5Q9JL61 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms