Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-4Q9EQM3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-4Q9EQM3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-4Q9EQM3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-4Q9EQM3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-4Q9EQM3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Gm13559-201ENSMUST00000120476 863 ntBASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-4Q9EQM3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm11539-201ENSMUST00000119837 557 ntBASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm13436-201ENSMUST00000120418 567 ntBASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm21814-202ENSMUST00000203277 873 ntBASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nkx2-4Q9EQM3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-4Q9EQM3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-4Q9EQM3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-4Q9EQM3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-4Q9EQM3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Gm7889-201ENSMUST00000185591 958 ntBASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Gm43183-201ENSMUST00000200632 547 ntBASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-4Q9EQM3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-4Q9EQM3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-4Q9EQM3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms