Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cpne8Q9DC53 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Rarb-207ENSMUST00000225921 2756 ntBASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cpne8Q9DC53 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cpne8Q9DC53 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpne8Q9DC53 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpne8Q9DC53 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpne8Q9DC53 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cpne8Q9DC53 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cpne8Q9DC53 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Cpne8Q9DC53 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cpne8Q9DC53 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.56■□□□□ 0.72
Cpne8Q9DC53 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cpne8Q9DC53 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.55■□□□□ 0.72
Cpne8Q9DC53 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.55■□□□□ 0.72
Cpne8Q9DC53 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cpne8Q9DC53 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Grk6-206ENSMUST00000224995 2971 ntBASIC19.54■□□□□ 0.72
Cpne8Q9DC53 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms