Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.51■□□□□ 0.71
Chmp2aQ9DB34 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp2aQ9DB34 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Gm27405-201ENSMUST00000184201 112 ntBASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Gm7291-201ENSMUST00000199147 382 ntBASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp2aQ9DB34 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp2aQ9DB34 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp2aQ9DB34 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Nespas-201ENSMUST00000143738 1083 ntBASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp2aQ9DB34 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Gm6420-201ENSMUST00000193885 723 ntBASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp2aQ9DB34 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms