Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssmem1Q9D9Y8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Mir5133-201ENSMUST00000174955 77 ntBASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Gm10602-201ENSMUST00000098239 609 ntBASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssmem1Q9D9Y8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Gm6365-201ENSMUST00000054711 744 ntBASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssmem1Q9D9Y8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ssmem1Q9D9Y8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ssmem1Q9D9Y8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ssmem1Q9D9Y8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ssmem1Q9D9Y8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ssmem1Q9D9Y8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.12■□□□□ 0.17
Ssmem1Q9D9Y8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms