Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
ShpkQ9D5J6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ShpkQ9D5J6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShpkQ9D5J6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.68■□□□□ 0.1
ShpkQ9D5J6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Gm14523-201ENSMUST00000117260 558 ntBASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ShpkQ9D5J6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ShpkQ9D5J6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ShpkQ9D5J6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShpkQ9D5J6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms