Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Mrpl55Q9CZ83 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Gm8493-201ENSMUST00000196881 489 ntBASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Mrpl55Q9CZ83 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Gm6139-201ENSMUST00000079261 882 ntBASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mrpl55Q9CZ83 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.28□□□□□ -0.44
Mrpl55Q9CZ83 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mrpl55Q9CZ83 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mrpl55Q9CZ83 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mrpl55Q9CZ83 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mrpl55Q9CZ83 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms