Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Mir7075-201ENSMUST00000184187 82 ntBASIC20.23■□□□□ 0.83
Ssr1Q9CY50 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssr1Q9CY50 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssr1Q9CY50 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.21■□□□□ 0.83
Ssr1Q9CY50 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.83
Ssr1Q9CY50 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssr1Q9CY50 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssr1Q9CY50 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssr1Q9CY50 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms