Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Khdc3Q9CWU5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Khdc3Q9CWU5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Khdc3Q9CWU5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Khdc3Q9CWU5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Golph3-205ENSMUST00000228671 2842 ntBASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Khdc3Q9CWU5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Gm9988-201ENSMUST00000069786 435 ntBASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Khdc3Q9CWU5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Khdc3Q9CWU5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Khdc3Q9CWU5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Khdc3Q9CWU5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms