Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lsm7Q9CQQ8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lsm7Q9CQQ8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Gm27011-201ENSMUST00000182352 972 ntBASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lsm7Q9CQQ8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lsm7Q9CQQ8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lsm7Q9CQQ8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.91■□□□□ 0.62
Lsm7Q9CQQ8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lsm7Q9CQQ8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lsm7Q9CQQ8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms