Protein–RNA interactions for Protein: Q9CQC5

Cdc42ep3, Cdc42 effector protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep3Q9CQC5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdc42ep3Q9CQC5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdc42ep3Q9CQC5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdc42ep3Q9CQC5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Cdc42ep3Q9CQC5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Cdc42ep3Q9CQC5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdc42ep3Q9CQC5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdc42ep3Q9CQC5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Gm2399-201ENSMUST00000104944 225 ntBASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Gm44549-201ENSMUST00000208351 577 ntBASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdc42ep3Q9CQC5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Gm13158-201ENSMUST00000122007 736 ntBASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdc42ep3Q9CQC5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Cdc42ep3Q9CQC5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Gm7860-201ENSMUST00000121190 879 ntBASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdc42ep3Q9CQC5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdc42ep3Q9CQC5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdc42ep3Q9CQC5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdc42ep3Q9CQC5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Gm18101-201ENSMUST00000215769 548 ntBASIC17.2■□□□□ 0.34
Cdc42ep3Q9CQC5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms