Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim16Q99PP9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.25■□□□□ 0.51
Trim16Q99PP9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.25■□□□□ 0.51
Trim16Q99PP9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.25■□□□□ 0.51
Trim16Q99PP9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim16Q99PP9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.24■□□□□ 0.51
Trim16Q99PP9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim16Q99PP9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim16Q99PP9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim16Q99PP9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Trim16Q99PP9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim16Q99PP9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim16Q99PP9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim16Q99PP9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim16Q99PP9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms