Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gtf2ird2Q99NI3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gtf2ird2Q99NI3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.21■□□□□ 0.67
Gtf2ird2Q99NI3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gtf2ird2Q99NI3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gtf2ird2Q99NI3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gtf2ird2Q99NI3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Gm6211-202ENSMUST00000167849 925 ntBASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gtf2ird2Q99NI3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms