Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf111Q99ML9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.17■□□□□ 0.5
Rnf111Q99ML9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rnf111Q99ML9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf111Q99ML9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf111Q99ML9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rnf111Q99ML9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf111Q99ML9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.16■□□□□ 0.5
Rnf111Q99ML9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf111Q99ML9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf111Q99ML9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf111Q99ML9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf111Q99ML9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.14■□□□□ 0.49
Rnf111Q99ML9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf111Q99ML9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rnf111Q99ML9 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.14■□□□□ 0.49
Rnf111Q99ML9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.13■□□□□ 0.49
Rnf111Q99ML9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf111Q99ML9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf111Q99ML9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rnf111Q99ML9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf111Q99ML9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf111Q99ML9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms