Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cdca3Q99M54 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdca3Q99M54 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdca3Q99M54 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Mir5133-201ENSMUST00000174955 77 ntBASIC17.33■□□□□ 0.36
Cdca3Q99M54 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.33■□□□□ 0.36
Cdca3Q99M54 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdca3Q99M54 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Gm10653-202ENSMUST00000139570 835 ntBASIC17.32■□□□□ 0.36
Cdca3Q99M54 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.32■□□□□ 0.36
Cdca3Q99M54 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdca3Q99M54 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.31■□□□□ 0.36
Cdca3Q99M54 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cdca3Q99M54 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.3■□□□□ 0.36
Cdca3Q99M54 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.3■□□□□ 0.36
Cdca3Q99M54 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.3■□□□□ 0.36
Cdca3Q99M54 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Golph3-205ENSMUST00000228671 2842 ntBASIC17.3■□□□□ 0.36
Cdca3Q99M54 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdca3Q99M54 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdca3Q99M54 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdca3Q99M54 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdca3Q99M54 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms