Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.91■□□□□ 0.78
Clp1Q99LI9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clp1Q99LI9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.9■□□□□ 0.78
Clp1Q99LI9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.9■□□□□ 0.78
Clp1Q99LI9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clp1Q99LI9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clp1Q99LI9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
Clp1Q99LI9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clp1Q99LI9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clp1Q99LI9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clp1Q99LI9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.87■□□□□ 0.77
Clp1Q99LI9 Flg-201ENSMUST00000050758 1488 ntBASIC19.87■□□□□ 0.77
Clp1Q99LI9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clp1Q99LI9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clp1Q99LI9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clp1Q99LI9 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.87■□□□□ 0.77
Clp1Q99LI9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clp1Q99LI9 Gm9987-201ENSMUST00000069768 567 ntBASIC19.87■□□□□ 0.77
Clp1Q99LI9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clp1Q99LI9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clp1Q99LI9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Gm11927-201ENSMUST00000118472 759 ntBASIC19.86■□□□□ 0.77
Clp1Q99LI9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.86■□□□□ 0.77
Clp1Q99LI9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.86■□□□□ 0.77
Clp1Q99LI9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clp1Q99LI9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.84■□□□□ 0.77
Clp1Q99LI9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Clp1Q99LI9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clp1Q99LI9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clp1Q99LI9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clp1Q99LI9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.83■□□□□ 0.77
Clp1Q99LI9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Clp1Q99LI9 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.83■□□□□ 0.77
Clp1Q99LI9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.83■□□□□ 0.77
Clp1Q99LI9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clp1Q99LI9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms