Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col20a1Q923P0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.22■■□□□ 1.15
Col20a1Q923P0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col20a1Q923P0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Col20a1Q923P0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col20a1Q923P0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col20a1Q923P0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Col20a1Q923P0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Col20a1Q923P0 Trmt13-210ENSMUST00000198454 880 ntBASIC22.21■■□□□ 1.15
Col20a1Q923P0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.21■■□□□ 1.15
Col20a1Q923P0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.21■■□□□ 1.15
Col20a1Q923P0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col20a1Q923P0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.21■■□□□ 1.15
Col20a1Q923P0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Col20a1Q923P0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col20a1Q923P0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Gm22240-201ENSMUST00000175225 82 ntBASIC22.19■■□□□ 1.14
Col20a1Q923P0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.19■■□□□ 1.14
Col20a1Q923P0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.18■■□□□ 1.14
Col20a1Q923P0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Col20a1Q923P0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.18■■□□□ 1.14
Col20a1Q923P0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Gm44549-201ENSMUST00000208351 577 ntBASIC22.17■■□□□ 1.14
Col20a1Q923P0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col20a1Q923P0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Gm13168-201ENSMUST00000121771 632 ntBASIC22.16■■□□□ 1.14
Col20a1Q923P0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Gm2559-201ENSMUST00000201323 363 ntBASIC22.16■■□□□ 1.14
Col20a1Q923P0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col20a1Q923P0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Gm12896-201ENSMUST00000118430 226 ntBASIC22.15■■□□□ 1.14
Col20a1Q923P0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col20a1Q923P0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col20a1Q923P0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Col20a1Q923P0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col20a1Q923P0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms