Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdha2Q91Y17 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha2Q91Y17 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha2Q91Y17 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha2Q91Y17 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha2Q91Y17 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha2Q91Y17 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Gm12933-201ENSMUST00000120203 872 ntBASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdha2Q91Y17 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdha2Q91Y17 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Gm7290-201ENSMUST00000104990 617 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Gm13148-201ENSMUST00000118892 745 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Gm12918-201ENSMUST00000120234 636 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Gm15710-201ENSMUST00000121821 636 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Gm5075-201ENSMUST00000196916 622 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.02■□□□□ 0.8
Pcdha2Q91Y17 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha2Q91Y17 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdha2Q91Y17 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 Golph3-205ENSMUST00000228671 2842 ntBASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha2Q91Y17 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms