Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdha8Q91Y12 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Rarb-207ENSMUST00000225921 2756 ntBASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdha8Q91Y12 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdha8Q91Y12 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdha8Q91Y12 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdha8Q91Y12 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gm38205-201ENSMUST00000192243 258 ntBASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gm9988-201ENSMUST00000069786 435 ntBASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdha8Q91Y12 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha8Q91Y12 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdha8Q91Y12 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms