Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb1Q91Y08 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb1Q91Y08 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb1Q91Y08 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb1Q91Y08 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb1Q91Y08 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb1Q91Y08 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Gm13234-201ENSMUST00000120010 747 ntBASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Gm10493-201ENSMUST00000097270 612 ntBASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb1Q91Y08 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb1Q91Y08 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb1Q91Y08 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb1Q91Y08 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Gm13534-201ENSMUST00000121169 513 ntBASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb1Q91Y08 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb1Q91Y08 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms