Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.65■□□□□ 0.58
Pcdhb3Q91XZ7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb3Q91XZ7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhb3Q91XZ7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb3Q91XZ7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.62■□□□□ 0.57
Pcdhb3Q91XZ7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb3Q91XZ7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Serp2-204ENSMUST00000228055 705 ntBASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb3Q91XZ7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb3Q91XZ7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.58■□□□□ 0.57
Pcdhb3Q91XZ7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb3Q91XZ7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb3Q91XZ7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms