Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb4Q91XZ6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb4Q91XZ6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb4Q91XZ6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhb4Q91XZ6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb4Q91XZ6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb4Q91XZ6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb4Q91XZ6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb4Q91XZ6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 BC021767-201ENSMUST00000126387 1716 ntBASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Gm27801-201ENSMUST00000184174 223 ntBASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhb4Q91XZ6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb4Q91XZ6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Gm26833-201ENSMUST00000180899 440 ntBASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Gm43017-201ENSMUST00000198296 752 ntBASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb4Q91XZ6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms