Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga6Q91XY2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhga6Q91XY2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga6Q91XY2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhga6Q91XY2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhga6Q91XY2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhga6Q91XY2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.52■□□□□ 0.56
Pcdhga6Q91XY2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhga6Q91XY2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhga6Q91XY2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhga6Q91XY2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhga6Q91XY2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhga6Q91XY2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms