Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H1fooQ8VIK3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H1fooQ8VIK3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Gm43060-201ENSMUST00000200621 289 ntBASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H1fooQ8VIK3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H1fooQ8VIK3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H1fooQ8VIK3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H1fooQ8VIK3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
H1fooQ8VIK3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H1fooQ8VIK3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H1fooQ8VIK3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
H1fooQ8VIK3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H1fooQ8VIK3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H1fooQ8VIK3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms