Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Golph3-202ENSMUST00000226517 2359 ntBASIC19.99■□□□□ 0.79
TraipQ8VIG6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TraipQ8VIG6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
TraipQ8VIG6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TraipQ8VIG6 Gm12896-201ENSMUST00000118430 226 ntBASIC19.97■□□□□ 0.79
TraipQ8VIG6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.97■□□□□ 0.79
TraipQ8VIG6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TraipQ8VIG6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TraipQ8VIG6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TraipQ8VIG6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TraipQ8VIG6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.95■□□□□ 0.78
TraipQ8VIG6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.95■□□□□ 0.78
TraipQ8VIG6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.94■□□□□ 0.78
TraipQ8VIG6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Notumos-201ENSMUST00000151998 2659 ntBASIC19.94■□□□□ 0.78
TraipQ8VIG6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TraipQ8VIG6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TraipQ8VIG6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TraipQ8VIG6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TraipQ8VIG6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms