Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdhr1Q8VHP6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdhr1Q8VHP6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdhr1Q8VHP6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cdhr1Q8VHP6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdhr1Q8VHP6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdhr1Q8VHP6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Gm13168-201ENSMUST00000121771 632 ntBASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Trmt13-210ENSMUST00000198454 880 ntBASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdhr1Q8VHP6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdhr1Q8VHP6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr1Q8VHP6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.22■□□□□ 0.51
Cdhr1Q8VHP6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Gm27275-201ENSMUST00000184318 272 ntBASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr1Q8VHP6 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms