Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sft2d2Q8VD57 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.15■□□□□ 0.02
Sft2d2Q8VD57 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sft2d2Q8VD57 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sft2d2Q8VD57 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sft2d2Q8VD57 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 Gm10399-202ENSMUST00000202768 748 ntBASIC15.11■□□□□ 0.01
Sft2d2Q8VD57 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms