Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgms1Q8VCQ6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sgms1Q8VCQ6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms1Q8VCQ6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms1Q8VCQ6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms1Q8VCQ6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms1Q8VCQ6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 Gm10493-201ENSMUST00000097270 612 ntBASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms1Q8VCQ6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sgms1Q8VCQ6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms1Q8VCQ6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sgms1Q8VCQ6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.27■□□□□ 0.83
Sgms1Q8VCQ6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sgms1Q8VCQ6 Reep4-203ENSMUST00000226563 1444 ntBASIC20.27■□□□□ 0.83
Sgms1Q8VCQ6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sgms1Q8VCQ6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.26■□□□□ 0.83
Sgms1Q8VCQ6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Gm9988-201ENSMUST00000069786 435 ntBASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms1Q8VCQ6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Gm13534-201ENSMUST00000121169 513 ntBASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms1Q8VCQ6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.23■□□□□ 0.83
Sgms1Q8VCQ6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms