Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sh3kbp1Q8R550 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3kbp1Q8R550 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3kbp1Q8R550 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Gm6420-201ENSMUST00000193885 723 ntBASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Gm4968-201ENSMUST00000071458 858 ntBASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3kbp1Q8R550 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Golph3-205ENSMUST00000228671 2842 ntBASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Gm13148-201ENSMUST00000118892 745 ntBASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Gm7860-201ENSMUST00000121190 879 ntBASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sh3kbp1Q8R550 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Gm10653-202ENSMUST00000139570 835 ntBASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3kbp1Q8R550 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Gm13534-201ENSMUST00000121169 513 ntBASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Nespas-201ENSMUST00000143738 1083 ntBASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Gm6365-201ENSMUST00000054711 744 ntBASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3kbp1Q8R550 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms