Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdpf1Q8R3A2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdpf1Q8R3A2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdpf1Q8R3A2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdpf1Q8R3A2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdpf1Q8R3A2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdpf1Q8R3A2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Cdpf1Q8R3A2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Gm11249-201ENSMUST00000117071 859 ntBASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Gm10698-201ENSMUST00000182663 604 ntBASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdpf1Q8R3A2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdpf1Q8R3A2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdpf1Q8R3A2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdpf1Q8R3A2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdpf1Q8R3A2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdpf1Q8R3A2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.52■□□□□ 0.07
Cdpf1Q8R3A2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cdpf1Q8R3A2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdpf1Q8R3A2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdpf1Q8R3A2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.51■□□□□ 0.07
Cdpf1Q8R3A2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Cdpf1Q8R3A2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdpf1Q8R3A2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Gm15378-201ENSMUST00000121894 207 ntBASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Gm44549-201ENSMUST00000208351 577 ntBASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdpf1Q8R3A2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Mir1199-201ENSMUST00000117015 119 ntBASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cdpf1Q8R3A2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms