Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.56■□□□□ 0.56
Hbp1Q8R316 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hbp1Q8R316 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hbp1Q8R316 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.54■□□□□ 0.56
Hbp1Q8R316 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
Hbp1Q8R316 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.54■□□□□ 0.56
Hbp1Q8R316 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Gm12527-201ENSMUST00000117967 564 ntBASIC18.53■□□□□ 0.56
Hbp1Q8R316 Gm10653-202ENSMUST00000139570 835 ntBASIC18.53■□□□□ 0.56
Hbp1Q8R316 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.53■□□□□ 0.56
Hbp1Q8R316 Gm20049-201ENSMUST00000219950 730 ntBASIC18.53■□□□□ 0.56
Hbp1Q8R316 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hbp1Q8R316 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hbp1Q8R316 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.52■□□□□ 0.56
Hbp1Q8R316 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Hbp1Q8R316 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hbp1Q8R316 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hbp1Q8R316 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hbp1Q8R316 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hbp1Q8R316 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hbp1Q8R316 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hbp1Q8R316 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
Hbp1Q8R316 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.49■□□□□ 0.55
Hbp1Q8R316 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hbp1Q8R316 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hbp1Q8R316 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hbp1Q8R316 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms