Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Zcchc9Q8R1J3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Zcchc9Q8R1J3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Zcchc9Q8R1J3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Gm10812-201ENSMUST00000099864 546 ntBASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Zcchc9Q8R1J3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Zcchc9Q8R1J3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Zcchc9Q8R1J3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Zcchc9Q8R1J3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Zcchc9Q8R1J3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zcchc9Q8R1J3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms