Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CipcQ8R0W1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CipcQ8R0W1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.66■□□□□ 0.42
CipcQ8R0W1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.65■□□□□ 0.42
CipcQ8R0W1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CipcQ8R0W1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CipcQ8R0W1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
CipcQ8R0W1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CipcQ8R0W1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CipcQ8R0W1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CipcQ8R0W1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CipcQ8R0W1 Gm13146-201ENSMUST00000118508 780 ntBASIC17.64■□□□□ 0.41
CipcQ8R0W1 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.64■□□□□ 0.41
CipcQ8R0W1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.64■□□□□ 0.41
CipcQ8R0W1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.64■□□□□ 0.41
CipcQ8R0W1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CipcQ8R0W1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.63■□□□□ 0.41
CipcQ8R0W1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CipcQ8R0W1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CipcQ8R0W1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CipcQ8R0W1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.61■□□□□ 0.41
CipcQ8R0W1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Gm10602-201ENSMUST00000098239 609 ntBASIC17.61■□□□□ 0.41
CipcQ8R0W1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CipcQ8R0W1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms