Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tram1l1Q8QZR0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tram1l1Q8QZR0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tram1l1Q8QZR0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tram1l1Q8QZR0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tram1l1Q8QZR0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tram1l1Q8QZR0 Gm2559-201ENSMUST00000201323 363 ntBASIC18.83■□□□□ 0.6
Tram1l1Q8QZR0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.83■□□□□ 0.6
Tram1l1Q8QZR0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.83■□□□□ 0.6
Tram1l1Q8QZR0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tram1l1Q8QZR0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tram1l1Q8QZR0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tram1l1Q8QZR0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Gm27275-201ENSMUST00000184318 272 ntBASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tram1l1Q8QZR0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Tram1l1Q8QZR0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tram1l1Q8QZR0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Tram1l1Q8QZR0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Golph3-202ENSMUST00000226517 2359 ntBASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tram1l1Q8QZR0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tram1l1Q8QZR0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Dio3-201ENSMUST00000097228 1449 ntBASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tram1l1Q8QZR0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tram1l1Q8QZR0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms