Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cystm1Q8K353 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Gm12821-201ENSMUST00000120022 600 ntBASIC11.73□□□□□ -0.53
Cystm1Q8K353 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cystm1Q8K353 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.72□□□□□ -0.53
Cystm1Q8K353 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC11.72□□□□□ -0.53
Cystm1Q8K353 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.72□□□□□ -0.53
Cystm1Q8K353 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cystm1Q8K353 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Golgb1-201ENSMUST00000023534 498 ntBASIC11.71□□□□□ -0.53
Cystm1Q8K353 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.71□□□□□ -0.53
Cystm1Q8K353 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cystm1Q8K353 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cystm1Q8K353 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cystm1Q8K353 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cystm1Q8K353 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cystm1Q8K353 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.7□□□□□ -0.54
Cystm1Q8K353 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.7□□□□□ -0.54
Cystm1Q8K353 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC11.7□□□□□ -0.54
Cystm1Q8K353 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms