Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.27■■□□□ 1.32
Smc5Q8CG46 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Smc5Q8CG46 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Gm27801-201ENSMUST00000184174 223 ntBASIC23.26■■□□□ 1.31
Smc5Q8CG46 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc5Q8CG46 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Gm45606-201ENSMUST00000209836 2795 ntBASIC23.25■■□□□ 1.31
Smc5Q8CG46 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Smc5Q8CG46 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.25■■□□□ 1.31
Smc5Q8CG46 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.25■■□□□ 1.31
Smc5Q8CG46 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc5Q8CG46 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Mir7075-201ENSMUST00000184187 82 ntBASIC23.24■■□□□ 1.31
Smc5Q8CG46 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Smc5Q8CG46 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Smc5Q8CG46 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC23.23■■□□□ 1.31
Smc5Q8CG46 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc5Q8CG46 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc5Q8CG46 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc5Q8CG46 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc5Q8CG46 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc5Q8CG46 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc5Q8CG46 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smc5Q8CG46 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Smc5Q8CG46 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smc5Q8CG46 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smc5Q8CG46 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Smc5Q8CG46 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smc5Q8CG46 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Smc5Q8CG46 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Smc5Q8CG46 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.18■■□□□ 1.3
Smc5Q8CG46 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC23.18■■□□□ 1.3
Smc5Q8CG46 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Smc5Q8CG46 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms